Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Biological sequences3
    • Community analysis3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Sequence analysis3
    • Sequence databases3
    • Shotgun metagenomics3
    • Taxonomy3
    • Assembly1
    • DNA metabarcoding1
    • Disease1
    • Environmental metabarcoding1
    • Epidemiology1
    • Function analysis1
    • Functional analysis1
    • Metabarcoding1
    • Metatranscriptomics1
    • Pathology1
    • Protein function analysis1
    • Protein function prediction1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence assembly1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • taxonomy_krona_chart3
    • FastQC2
    • MetaPhlAn2
    • MultiQC2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • Cutadapt1
    • FastTree1
    • Flye1
    • GraPhlAn1
    • HUMAnN21
    • KrakenTools1
    • Krona1
    • MLST1
    • Medaka1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • SAMtools1
    • SortMeRNA1
    • export2graphlan1
    • fastp1
    • ggplot21
    • humann1
    • kraken21
    • mothur1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • Microbiome3
    • microgalaxy3
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • cyoa1
    • metatranscriptomics1
    • Show N_FILTERS more
    • Competency level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Saskia Hiltemann2
    • Emma Leith1
    • Engy Nasr1
    • Paul Zierep1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Subina Mehta1
    • Show N_FILTERS more
    • Contributor
    • Engy Nasr
    • Saskia Hiltemann449
    • Helena Rasche373
    • Björn Grüning313
    • Bérénice Batut186
    • Nicola Soranzo89
    • Cristóbal Gallardo79
    • Anthony Bretaudeau78
    • Wendi Bacon57
    • Martin Čech55
    • Niall Beard55
    • Beatriz Serrano-Solano46
    • Teresa Müller46
    • Armin Dadras45
    • William Durand43
    • Mehmet Tekman42
    • Gildas Le Corguillé40
    • Yvan Le Bras40
    • Pavankumar Videm39
    • Melanie Föll35
    • Anup Kumar32
    • Wolfgang Maier32
    • Marius van den Beek29
    • Marie Josse28
    • Subina Mehta28
    • Simon Bray24
    • Donny Vrins23
    • Anne Fouilloux22
    • Maria Doyle22
    • Nate Coraor22
    • Peter van Heusden21
    • Leonid Kostrykin20
    • Anton Nekrutenko18
    • Bazante Sanders18
    • Julia Jakiela18
    • Tristan Reynolds18
    • Deepti Varshney17
    • Khaled Jum'ah17
    • Lucille Delisle17
    • Petros Kountouris16
    • Pratik Jagtap16
    • Paul Zierep15
    • Delphine Lariviere14
    • David López12
    • Diana Chiang Jurado12
    • Mélanie Petera12
    • Timothy J. Griffin12
    • Daniela Schneider11
    • Dave Clements11
    • Katarzyna Kamieniecka11
    • Marisa Loach11
    • Matthias Bernt11
    • Pablo Moreno11
    • Stéphanie Robin11
    • Simon Gladman10
    • Anna Syme9
    • Mallory Freeberg9
    • Alexandre Cormier8
    • Amirhossein Naghsh Nilchi8
    • Florian Heyl8
    • Kaivan Kamali8
    • Verena Moosmann8
    • Christopher Barnett7
    • Katherine Do7
    • Melissa Burke7
    • Morgan Howells7
    • Clemens Blank6
    • Ekaterina Polkh6
    • Florian Christoph Sigloch6
    • Hans-Rudolf Hotz6
    • Paulo Cilas Morais Lyra Junior6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Fabio Cumbo5
    • Linelle Abueg5
    • Riccardo Massei5
    • Wandrille Duchemin5
    • olisand5
    • Andrea Bagnacani4
    • Coline Royaux4
    • Fotis E. Psomopoulos4
    • Joachim Wolff4
    • Laura Leroi4
    • Nadia Goué4
    • Natalie Whitaker-Allen4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Sotiroula Chatzimatthaiou4
    • Anika Erxleben3
    • Eli Chadwick3
    • Enis Afgan3
    • Erwan Corre3
    • Jasper Ouwerkerk3
    • Jennifer Hillman-Jackson3
    • Kenza Bazi-Kabbaj3
    • Krzysztof Poterlowicz3
    • Maria Christina Maniou3
    • Martijn Kersloot3
    • Mateo Boudet3
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Target audience: Students

and Contributors: Engy Nasr

3 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • Beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Analyses of metagenomics data - The global picture

    • Beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.