Training materials
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e-learning
SARS-CoV-2 Viral Sample Alignment and Variant Visualization
• BeginnerSequence analysis Sequence analysis covid19 gmod jbrowse1 -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• BeginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis
• BeginnerUsing Galaxy and Managing your Data covid19 ncbi -
e-learning
Automating Galaxy workflows using the command line
• BeginnerUsing Galaxy and Managing your Data covid19 variant-analysis workflows -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• BeginnerSequence assembly Assembly covid19 -
slides
Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2
• BeginnerUsing Galaxy and Managing your Data covid19 ncbi