Training materials
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e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
e-learning
Binning of metagenomic sequencing data
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• IntermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy … -
e-learning
Identifying tuberculosis transmission links: from SNPs to transmission clusters
•• IntermediateEvolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote -
e-learning
metaQuantome 3: Taxonomy
•• IntermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy Proteomics microgalaxy -
e-learning
metaQuantome 2: Function
•• IntermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Proteomics microgalaxy -
e-learning
metaQuantome 1: Data creation
•• IntermediateProteomics Proteogenomics Biodiversity Taxonomy Proteomics microgalaxy