Training materials
-
Nicolas Delhomme - Bastian Schiffthaler - October 2014 EMBO course material
RNA-Seq FASTQ GFF3 BAM Populus-tremula RNA-Seq Pre-processing QC Alignment Annotation …
-
Edinburgh genomics introduction to RNA-seq data analysis
-
Differential expression analysis on the Robinson, Delhomme et al. dataset.
RNA-Seq RNA-Seq Differential-expression R-programming Statistical-model
-
Guidelines for this folder
-
Exercises for the course RNA-seq data analysis with Chipster
FASTQ QC Pre-processing Alignment BAM Expression-estimation Feature-summarisation Differential-expression Statistical-model Exploratory-analysis
-
Day 1 - RNA-Seq Analysis
Alignment BAM FASTA FASTQ QC
-
Data objects for R practice codes
R-programming
-
Introduction to NGS and RNA-seq
HTS-introduction Data-format Alignment Differential-expression Feature-summarisation QC
-
RNA-seq module Frederik Coppens
RNA-Seq RNA-Seq Alignment BAM FASTQ Feature-summarisation Pre-processing QC
-
Day 2 - RNA-Seq Analysis
Alignment BAM FASTA FASTQ QC Exploratory-analysis Feature-summarisation Pre-processing