- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Exomes46
- Genome annotation46
- Genomes46
- Genomics46
- Personal genomics46
- Synthetic genomics46
- Viral genomics46
- Whole genomes46
- Comparative transcriptomics42
- Transcriptome42
- Transcriptomics42
- Bayesian methods34
- Biostatistics34
- Descriptive statistics34
- Gaussian processes34
- Inferential statistics34
- Markov processes34
- Multivariate statistics34
- Probabilistic graphical model34
- Probability34
- Statistics34
- Statistics and probability34
- Biological sequences32
- Sequence analysis32
- Sequence databases32
- Bottom-up proteomics29
- Community analysis29
- Discovery proteomics29
- Environmental microbiology29
- MS-based targeted proteomics29
- MS-based untargeted proteomics29
- Metaproteomics29
- Microbial ecology29
- Microbiome29
- Molecular community analysis29
- Peptide identification29
- Protein and peptide identification29
- Proteomics29
- Quantitative proteomics29
- Targeted proteomics29
- Top-down proteomics29
- Assembly28
- Sequence assembly28
- Metagenomics27
- Shotgun metagenomics27
- Biodiversity23
- Antimicrobial stewardship22
- Medical microbiology22
- Microbial genetics22
- Microbial physiology22
- Microbial surveillance22
- Microbiological surveillance22
- Microbiology22
- Molecular infection biology22
- Molecular microbiology22
- Taxonomy15
- Computational ecology14
- Diffraction experiment14
- Ecoinformatics14
- Ecological informatics14
- Ecology14
- Ecosystem science14
- Imaging14
- Microscopy14
- Microscopy imaging14
- Optical super resolution microscopy14
- Photonic force microscopy14
- Photonic microscopy14
- DNA variation13
- Genetic variation13
- Genomic variation13
- Mutation13
- Polymorphism13
- Somatic mutations13
- Epigenomics11
- Exometabolomics10
- LC-MS-based metabolomics10
- MS-based metabolomics10
- MS-based targeted metabolomics10
- MS-based untargeted metabolomics10
- Mass spectrometry-based metabolomics10
- Metabolites10
- Metabolome10
- Metabolomics10
- Metabonomics10
- NMR-based metabolomics10
- Algorithms9
- Computer programming9
- Data structures9
- Programming languages9
- Software development9
- Software engineering9
- Computational chemistry7
- De novo genome sequencing6
- Epidemiology6
- Genome sequencing6
- Public health6
- Public health and epidemiology6
- WGS6
- Whole genome resequencing6
- Show N_FILTERS more
-
-
-
Tool
- Galaxy304
- FastQC35
- MultiQC23
- SAMtools21
- BEDTools16
- scikit-learn16
- JBrowse15
- BWA14
- DeepTools13
- SCANPY13
- fastp13
- BLAST11
- Cutadapt11
- Falco11
- QUAST11
- GEMINI10
- STAR10
- taxonomy_krona_chart10
- BUSCO9
- NanoPlot9
- FreeBayes8
- Trimmomatic8
- ggplot28
- Bandage7
- Galaxy Image Analysis7
- msConvert7
- BamTools6
- Biopython6
- HISAT26
- Unicycler6
- Workflow4Metabolomics6
- gffread6
- scikit-image6
- BCFtools5
- FASTX-Toolkit5
- Flye5
- Galactic Circos5
- MaxQuant5
- MetaPhlAn5
- RSeQC5
- Trim Galore5
- anndata5
- kraken25
- xcms5
- Bowtie 24
- KrakenTools4
- MACS4
- MAFFT4
- MSstats4
- Minimap24
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
- Newick Utilities4
- Open Babel4
- Salmon4
- StringTie4
- annotatemyids4
- compute_sequence_length4
- gffcompare4
- mothur4
- seqtk4
- Apollo3
- Bracken3
- Bwa-mem23
- Cardinal3
- Clustal 1.8 (Clustal W, Clustal X)3
- DESeq23
- Diamond3
- DropletUtils3
- FastTree3
- GOseq3
- GraPhlAn3
- Merqury3
- OMArk3
- RStudio3
- SeqCode3
- SortMeRNA3
- Stacks3
- UniProt3
- bx-python3
- export2graphlan3
- humann3
- pyGenomeTracks3
- snippy3
- Bakta2
- Bio3D2
- Bowtie2
- COMBAT-TB Workbench2
- ChIPpeakAnno2
- CheckM2
- Circos2
- Combine Metaphlan and HUMAnN2
- European Nucleotide Archive (ENA)2
- FASTQE2
- FeatureCounts2
- GECKO2
- GOEnrichment2
- GenomeScope 2.02
- Gromacs2
- HUMAnN22
- Heinz2
- Show N_FILTERS more
-
-
-
Content provider
- GTN331
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy38
- Single Cell34
- Statistics and machine learning33
- biodiversity31
- Genome Annotation29
- Proteomics29
- Transcriptomics27
- Microbiome25
- Assembly20
- jbrowse116
- prokaryote16
- Ecology14
- Imaging14
- gmod14
- Variant Analysis13
- Epigenetics11
- Sequence analysis11
- paper-replication11
- work-in-progress11
- MIGHTS10
- Metabolomics10
- eukaryote10
- metabolomics10
- Climate9
- Foundations of Data Science9
- Introduction to Galaxy Analyses9
- cyoa9
- interactive-tools9
- jupyter-notebook9
- plants9
- 10x8
- Image segmentation8
- label-free8
- Computational chemistry7
- assembly7
- metagenomics7
- nanopore7
- DDA6
- EBV dataset6
- Using Galaxy and Managing your Data6
- Visualisation6
- español6
- illumina6
- metabarcoding6
- transcriptomics6
- Digital Humanities5
- EBV workflow5
- Overlay5
- bacteria5
- covid195
- deutsch5
- italiano5
- label-TMT115
- one-health5
- 16S4
- DIA4
- Evolution4
- collections4
- deconvolution4
- ecology4
- exposomics4
- galaxy-intro4
- gc-ms4
- genetic composition EBV class4
- lc-ms4
- mouse4
- single-cell4
- ChIP-seq3
- Conversion3
- Deep learning3
- Image annotation3
- QC3
- RAD-seq3
- amr3
- climate3
- data management3
- epigenetics3
- essential genes3
- eukaryota3
- imaging3
- mass spectrometry imaging3
- metatranscriptomics3
- pangeo3
- proteogenomics3
- rmarkdown-notebook3
- 3D image2
- Braker32
- Data handling2
- Data management2
- Data sharing2
- EML2
- FAIR2
- Fluorescence microscopy2
- HeLa2
- Image thresholding2
- Isolated object tracking2
- Multi-channel image2
- Object counting2
- Object feature extraction2
- Synthetic Biology2
- Show N_FILTERS more
-
-
-
Competency level
- Beginner258
- Intermediate66
- Advanced7
- Show N_FILTERS more
-
-
-
Target audience
- Students330
- Instructors1
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut40
- Saskia Hiltemann26
- Subina Mehta23
- Helena Rasche19
- Anthony Bretaudeau17
- Anne Fouilloux14
- Björn Grüning14
- Anton Nekrutenko13
- Mehmet Tekman13
- James Johnson12
- Katherine Do12
- Maria Doyle12
- Anup Kumar11
- Cristóbal Gallardo11
- Delphine Lariviere11
- Pavankumar Videm11
- Pratik Jagtap11
- Yvan Le Bras11
- Simon Gladman10
- Wendi Bacon10
- Melanie Föll9
- Simon Bray9
- Kaivan Kamali8
- Timothy J. Griffin8
- Wolfgang Maier8
- Anika Erxleben7
- Anna Syme7
- Julia Jakiela7
- Nicola Soranzo7
- Paul Zierep7
- Praveen Kumar7
- Diana Chiang Jurado6
- Emma Leith6
- Erwan Corre6
- Jeremy Goecks6
- Junhao Qiu6
- Leonid Kostrykin6
- Matthias Fahrner6
- Paulo Cilas Morais Lyra Junior6
- Stéphanie Robin6
- Alex Ostrovsky5
- Alexandre Cormier5
- Christopher Barnett5
- Daniel Blankenberg5
- Dechen Bhuming5
- Joachim Wolff5
- Katarzyna Kamieniecka5
- Khaled Jum'ah5
- Krzysztof Poterlowicz5
- Laura Leroi5
- Ray Sajulga5
- Valentin Loux5
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Bazante Sanders4
- Clemens Blank4
- Coline Royaux4
- Daniela Schneider4
- Dave Clements4
- Florian Christoph Sigloch4
- Florian Heyl4
- Fotis E. Psomopoulos4
- Helge Hecht4
- Hélène Chiapello4
- Khai Van Dang4
- Lucille Delisle4
- Mallory Freeberg4
- Marisa Loach4
- Mateo Boudet4
- Morgan Howells4
- Mélanie Petera4
- Nadia Goué4
- Polina Polunina4
- Romane LIBOUBAN4
- Vivek Bhardwaj4
- Beatriz Serrano-Solano3
- Belinda Phipson3
- Engy Nasr3
- Fabio Cumbo3
- Fidel Ramirez3
- Gildas Le Corguillé3
- Jean-François Martin3
- Marie Crane3
- Miguel Roncoroni3
- Mo Heydarian3
- Riccardo Massei3
- Tharindu Senapathi3
- The Carpentries3
- Torsten Seemann3
- Workflow4Metabolomics core team3
- Alyssa Pybus2
- Andrea Bagnacani2
- Anne Pajon2
- Anne Siegel2
- Brandon Pickett2
- Camila Goclowski2
- Chao Zhang2
- Christoph Stritt2
- Cristina Martins Rodrigues2
- Daniela Brites2
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann286
- Helena Rasche232
- Björn Grüning221
- Bérénice Batut129
- Nicola Soranzo67
- Cristóbal Gallardo56
- Anthony Bretaudeau54
- Niall Beard45
- Pavankumar Videm42
- Martin Čech38
- Teresa Müller35
- Armin Dadras33
- Mehmet Tekman33
- Gildas Le Corguillé31
- Wendi Bacon31
- William Durand30
- Melanie Föll26
- Beatriz Serrano-Solano25
- Anup Kumar24
- Wolfgang Maier24
- Subina Mehta22
- Maria Doyle20
- Simon Bray20
- Yvan Le Bras18
- Tristan Reynolds17
- Anne Fouilloux15
- Deepti Varshney15
- Julia Jakiela14
- Lucille Delisle14
- Nate Coraor14
- Paul Zierep14
- Leonid Kostrykin13
- Pratik Jagtap13
- Timothy J. Griffin12
- Anton Nekrutenko11
- Delphine Lariviere11
- Diana Chiang Jurado11
- Marie Josse10
- Mélanie Petera10
- Anna Syme9
- Marisa Loach9
- Matthias Bernt9
- Daniela Schneider8
- Kaivan Kamali8
- Mallory Freeberg8
- Marius van den Beek8
- Pablo Moreno8
- Simon Gladman8
- Stéphanie Robin8
- Amirhossein Naghsh Nilchi7
- David López7
- Katherine Do7
- Verena Moosmann7
- Alexandre Cormier6
- Florian Heyl6
- Hans-Rudolf Hotz6
- Morgan Howells6
- Paulo Cilas Morais Lyra Junior6
- Alireza Khanteymoori5
- Bert Droesbeke5
- Christopher Barnett5
- Clemens Blank5
- Fabio Cumbo5
- Linelle Abueg5
- Peter van Heusden5
- Clea Siguret4
- Ekaterina Polkh4
- Florian Christoph Sigloch4
- Bazante Sanders3
- Coline Royaux3
- Dave Clements3
- Donny Vrins3
- Engy Nasr3
- Enis Afgan3
- Joachim Wolff3
- Katarzyna Kamieniecka3
- Mateo Boudet3
- Miaomiao Zhou3
- Natalie Whitaker-Allen3
- Timon Schlegel3
- Xavier Garnier3
- Alex Ostrovsky2
- Andrea Bagnacani2
- Anika Erxleben2
- Camila Goclowski2
- Carlos Chee Mendonça2
- Christine Oger2
- Christoph Stritt2
- CicoZhang2
- Daniel Blankenberg2
- Esteban Perez-Wohlfeil2
- Fidel Ramirez2
- Graeme Tyson2
- Helge Hecht2
- Igor Makunin2
- Jasper Ouwerkerk2
- Jennifer Hillman-Jackson2
- Jonathan Kreplak2
- Jonathan Manning2
- Junhao Qiu2
- Show N_FILTERS more
-
-
-
Resource type
- e-learning289
- slides42
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets
- Associated Workflows308
- Jupyter Notebook (with Solutions)51
- Jupyter Notebook (without Solutions)51
- Input datasets32
- Research Data Management in Life Sciences11
- Associated slides9
- The Carpentries7
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- DMPonline3
- Data Stewardship Wizard3
- Development in Galaxy slides3
- Slides3
- Workshop recording3
- ChIP-Seq data analysis dataset2
- DisProt2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- ARROWSMITH1
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- COBRA Toolbox1
- CanCOGeN1
- Contributing to the Galaxy Training Material slides1
- DMPortal1
- DS Wizard ELIXIR-Norway 1
- Data Visualisation (theory) 1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- ENA1
- Event1
- FAIR for busy biologists1
- FAIR in (biological) practice1
- GEEM1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Galaxy Server administration slides1
- Galaxy project guided tours1
- Genome Annotation slides1
- Genomics England PanelApp1
- GitHub1
- HoloFood Project1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- MGnify1
- MetaboLights1
- MobiDB1
- Next generation biobanking ontology (NGBO)1
- OpenCloning1
- OpenRefine1
- Public Health Alliance for Genomic Epidemiology1
- R basics1
- RCN Open data policy 1
- RDMkit1
- REPET image Docker1
- RNA-seq data package1
- Ready For BioData Management?1
- Slides for Introduction to statistics with R 1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- Video Walkthrough of the Poster1
- Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
- Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
- compareMS21
- elabFTW1
- pydna1
- recorded guidance on how to install a SciNote account1
- recorded intro to hackathon1
- recorded presentation on integration of ELNs in nanosciences1
- seq-seq-pan1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Hide archived materials
