Training materials
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e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
e-learning
QIIME 2 Cancer Microbiome Intervention
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome diversity metabarcoding microgalaxy … -
e-learning
QIIME 2 Moving Pictures
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome diversity metagenomics microgalaxy taxonomic profiling -
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• BeginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology Sequence analysis bacteria illumina microgalaxy -
e-learning
Identification of the micro-organisms in a beer using Nanopore sequencing
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Taxonomic Profiling and Visualization of Metagenomic Data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
e-learning
16S Microbial Analysis with mothur (extended)
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy