- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Sequence analysis
- Exomes41
- Genome annotation41
- Genomes41
- Genomics41
- Personal genomics41
- Synthetic genomics41
- Viral genomics41
- Whole genomes41
- Comparative transcriptomics35
- Transcriptome35
- Transcriptomics35
- Bayesian methods32
- Biostatistics32
- Descriptive statistics32
- Gaussian processes32
- Inferential statistics32
- Markov processes32
- Multivariate statistics32
- Probabilistic graphical model32
- Probability32
- Statistics32
- Statistics and probability32
- Biodiversity31
- Biological sequences31
- Sequence databases31
- Assembly29
- Sequence assembly29
- Community analysis28
- Environmental microbiology28
- Microbial ecology28
- Microbiome28
- Molecular community analysis28
- Bottom-up proteomics26
- Discovery proteomics26
- MS-based targeted proteomics26
- MS-based untargeted proteomics26
- Metagenomics26
- Metaproteomics26
- Peptide identification26
- Protein and peptide identification26
- Proteomics26
- Quantitative proteomics26
- Shotgun metagenomics26
- Targeted proteomics26
- Top-down proteomics26
- Computational ecology20
- Ecoinformatics20
- Ecological informatics20
- Ecology20
- Ecosystem science20
- Antimicrobial stewardship18
- Diffraction experiment18
- Imaging18
- Medical microbiology18
- Microbial genetics18
- Microbial physiology18
- Microbial surveillance18
- Microbiological surveillance18
- Microbiology18
- Microscopy18
- Microscopy imaging18
- Molecular infection biology18
- Molecular microbiology18
- Optical super resolution microscopy18
- Photonic force microscopy18
- Photonic microscopy18
- Taxonomy14
- DNA variation13
- Genetic variation13
- Genomic variation13
- Mutation13
- Polymorphism13
- Somatic mutations13
- Epigenomics11
- Computational chemistry8
- De novo genome sequencing6
- Epidemiology6
- Exometabolomics6
- Genome sequencing6
- LC-MS-based metabolomics6
- MS-based metabolomics6
- MS-based targeted metabolomics6
- MS-based untargeted metabolomics6
- Mass spectrometry-based metabolomics6
- Metabolites6
- Metabolome6
- Metabolomics6
- Metabonomics6
- NMR-based metabolomics6
- Public health6
- Public health and epidemiology6
- WGS6
- Whole genome resequencing6
- Whole genome sequencing6
- Communicable disease5
- DNA metabarcoding5
- Environmental metabarcoding5
- Gene and protein families5
- Gene families5
- Show N_FILTERS more
-
-
-
Tool
- Galaxy31
- taxonomy_krona_chart9
- FastQC8
- JBrowse6
- BamTools4
- Cutadapt4
- MetaPhlAn4
- MultiQC4
- NanoPlot4
- SAMtools4
- fastp4
- kraken24
- mothur4
- KrakenTools3
- MAFFT3
- Newick Utilities3
- BEDTools2
- BLAST2
- BWA2
- Bakta2
- Bracken2
- FASTQE2
- FASTX-Toolkit2
- GraPhlAn2
- HUMAnN22
- Minimap22
- SortMeRNA2
- Trimmomatic2
- bx-python2
- export2graphlan2
- ggplot22
- humann2
- pycoQC2
- seqtk2
- staramr2
- tbl2gff32
- ABRicate1
- Apollo1
- BCFtools1
- Bandage1
- Bowtie1
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- Combine Metaphlan and HUMAnN1
- DeepTools1
- Diamond1
- Falco1
- FastTree1
- Flye1
- FreeBayes1
- ISEScan1
- Infernal1
- Integron Finder1
- Krona1
- MAPseq1
- MLST1
- Medaka1
- NCBI fcs1
- PRINSEQ1
- PlasmidFinder1
- QIIME1
- Racon1
- RapidNJ1
- Recentrifuge1
- SeqPrep1
- TRANSIT1
- Unicycler1
- Vcflib1
- ampvis1
- biomformat1
- cmsearch-deoverlap1
- compute_sequence_length1
- cshl_fastx_reverse_complement1
- dada21
- ete1
- iqtree1
- lotus21
- miniasm1
- orfipy1
- phyloseq1
- snippy1
- trimAl1
- varVAMP1
- Show N_FILTERS more
-
-
-
Content provider
- GTN31
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy20
- Microbiome13
- Sequence analysis10
- Genome Annotation6
- gmod5
- jbrowse15
- prokaryote5
- 16S4
- metabarcoding4
- bacteria3
- illumina3
- nanopore3
- Variant Analysis2
- amr2
- biodiversity2
- deutsch2
- español2
- italiano2
- metagenomics2
- metatranscriptomics2
- plants2
- Heatmap1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- amplicon1
- annotation1
- apollo21
- assembly1
- beer1
- citizen science1
- cookbook1
- covid191
- cyoa1
- essential genes1
- eukaryote1
- evolution1
- microbiome1
- one-health1
- plasmids1
- taxonomic abundance1
- taxonomic profiling1
- taxonomy1
- tnseq1
- vgp1
- virology1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner29
- Intermediate2
- Show N_FILTERS more
-
-
-
Target audience
- Students31
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut17
- Saskia Hiltemann8
- Anthony Bretaudeau3
- Engy Nasr3
- Paul Zierep3
- Alexandre Cormier2
- Anna Syme2
- Anton Nekrutenko2
- Cristóbal Gallardo2
- Dave Clements2
- Emma Leith2
- Erwan Corre2
- Helena Rasche2
- Joachim Wolff2
- Laura Leroi2
- Pratik Jagtap2
- Praveen Kumar2
- Ray Sajulga2
- Simon Gladman2
- Stéphanie Robin2
- Subina Mehta2
- Torsten Seemann2
- Wolfgang Maier2
- Alex Ostrovsky1
- Bazante Sanders1
- Cameron Hyde1
- Clea Siguret1
- Coline Royaux1
- Deepti Varshney1
- Delphine Lariviere1
- Didier Debroas1
- Elischa Berger1
- Eric Tvedte1
- Maria Doyle1
- Mateo Boudet1
- Nadia Goué1
- Nathan Dunn1
- Polina Polunina1
- Rand Zoabi1
- Siyu Chen1
- Sophia Hampe1
- Teresa Müller1
- Verena Moosmann1
- Willem de Koning1
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann29
- Bérénice Batut26
- Helena Rasche24
- Björn Grüning20
- Anthony Bretaudeau10
- Nicola Soranzo9
- Niall Beard8
- Cristóbal Gallardo7
- Paul Zierep7
- Teresa Müller7
- William Durand7
- Tristan Reynolds6
- Wolfgang Maier5
- Deepti Varshney4
- Maria Doyle4
- Anna Syme3
- Engy Nasr3
- Alexandre Cormier2
- Anton Nekrutenko2
- Anup Kumar2
- Christine Oger2
- Clea Siguret2
- Gildas Le Corguillé2
- Igor Makunin2
- Mateo Boudet2
- Matthias Bernt2
- Michael Thang2
- Nate Coraor2
- Simon Bray2
- Simon Gladman2
- Swathi Nataraj2
- Verena Moosmann2
- Willem de Koning2
- Alex Ostrovsky1
- Anika Erxleben1
- Anne Fouilloux1
- Bazante Sanders1
- Beatriz Serrano-Solano1
- Bert Droesbeke1
- Delphine Lariviere1
- Donny Vrins1
- Ekaterina Polkh1
- Eric Tvedte1
- Hans-Rudolf Hotz1
- Jennifer Hillman-Jackson1
- Linelle Abueg1
- Mehmet Tekman1
- Miaomiao Zhou1
- Mélanie Petera1
- Natalie Kucher1
- Nuwan Goonasekera1
- Peter van Heusden1
- Santino Faack1
- Siyu Chen1
- Stéphanie Robin1
- Tarnima Omara1
- Vijay1
- mmiladi1
- pimarin1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning29
- slides2
- Show N_FILTERS more
-
-
-
Related resource
- Associated Workflows
- Associated Training Datasets32
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials