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Showing 30 materials out of 529

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ELIXIR TeSS

PhenoMeNal: accessing metabolomics workflows in Galaxy

• Beginner
Metabolomics Chemical biology Galaxy
ELIXIR TeSS

Video

A common framework for designing portable federated pipelines

•• Intermediate
Data architecture, analysis and design data access federated data analysis
ELIXIR TeSS

Installation instructions, Manual

How to use Common Workflow Language

• Beginner
Workflows commonwl common workflow language CWL Workflows eLearning EeLP
ELIXIR TeSS

Recorded webinar, Slidedeck

Europe PMC API workshop: Part two

API Literature search Literature database search Europe PMC Annotations
ELIXIR TeSS

Online material, Recording, hands-on tutorial

MaBoSS: a tool for modelling biological systems

• Beginner
Mathematical modelling cancer Signalling boolean modelling logical modelling
ELIXIR TeSS

Recorded webinar

Exploring metabolite metabolism using the Enzyme Portal

Enzymes Metabolomics
ELIXIR TeSS

Training materials, Video

GA4GH Passports and ELIXIR AAI

•• Intermediate
AAI GA4GH Passports Auhtorisation
ELIXIR TeSS

Video

Status Update Code of Conduct: Teaming up & Talking about it

•• Intermediate
GDPR Healthcare research data harmonization
ELIXIR TeSS

Webinar

EBI Metagenomics: analysing and exploring metagenomics data

Metagenomics Metagenomics MGnify Sequence Analysis Microbiology
ELIXIR TeSS

Video

Useful ontologies for harmonizing cohort data

• Beginner
Data integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation
ELIXIR TeSS

Video

Applying data standards to the harmonization of COVID-19 datasets from different sources

• Beginner
Data integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies
ELIXIR TeSS

Video

Annotating data using next generation biobanking ontology (NGBO)

• Beginner
Data integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary
ELIXIR TeSS

Video

FAIR software tools

• Beginner
Software engineering FAIR software tools Software
ELIXIR TeSS

Video

Making cohort data FAIR

• Beginner
Data integration and warehousing Data management FAIR data Cohort data Ontologies Standards
ELIXIR TeSS

Video

Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality?

• Beginner
Data management FAIR data Health data Open science
ELIXIR TeSS

Video

Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects

•• Intermediate
Data architecture, analysis and design Cloud computing Data analysis Standards Translational research
ELIXIR TeSS

Series of videos

CINECA discovery service catalog

•• Intermediate
Cohort data Standards federated data analysis Beacon queries
ELIXIR TeSS

Tutorial

MGnify quick tour

Metagenomics Metagenomics Sequence analysis MGnify Microbiology
ELIXIR TeSS

e-learning

Structural volume data

Electron microscopy Protein structure analysis Structural biology Structural bioinformatics Segmentation Volume matching
ELIXIR TeSS

Life Sciences Literature Database

Finding the data behind research publications with Europe PMC

Biomedical Literature Data links databases External links
ELIXIR TeSS

Life Sciences Literature Database

Discovering scientific evidence using Europe PMC SciLite annotation

Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
ELIXIR TeSS

e-learning

Ensembl: Quick tour

Genome sequencing Gene transcripts Variants Sequence alignments
ELIXIR TeSS

e-learning

Bioinformatics for the terrified: An introduction to the science of bioinformatics

Bioinformatics Ontology and terminology Introduction Databases Metadata Controlled vocabularies Beginners New to bioinformatics field Basic
ELIXIR TeSS

e-learning

Reactome: Tools for analysing biological pathways

Pathway database Systems biology Network analysis
ELIXIR TeSS

Course materials

Managing a Bioinformatics Core Facility: CABANA Virtual Workshop Handbook
ELIXIR TeSS

Recorded webinar

Annotate your proteins with the UniProt Functional Annotation system UniFire

Proteins Function analysis
ELIXIR TeSS

Webinar

Preprint discovery 101: Tips & tricks for authors and readers

Europe PMC, Preprints
ELIXIR TeSS

Course materials

Proteomics bioinformatics
ELIXIR TeSS

Webinar

Integrating publications into bioinformatics analysis

Europe PMC REST API Bioinformatic analysis
ELIXIR TeSS

Recorded webinar

HPC boosts mathematical models’ promises of personalised medicine

Simulation experiment Computational biology Personalised medicine

Showing 30 events out of 48 (also found 1969 past events)

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Activity log

ELIXIR node

Country

Status

Training coordinator

PhenoMeNal: accessing metabolomics workflows in Galaxy

A common framework for designing portable federated pipelines

How to use Common Workflow Language

Europe PMC API workshop: Part two

MaBoSS: a tool for modelling biological systems

Exploring metabolite metabolism using the Enzyme Portal

GA4GH Passports and ELIXIR AAI

Status Update Code of Conduct: Teaming up & Talking about it

EBI Metagenomics: analysing and exploring metagenomics data

Useful ontologies for harmonizing cohort data

Applying data standards to the harmonization of COVID-19 datasets from different sources

Annotating data using next generation biobanking ontology (NGBO)

FAIR software tools

Making cohort data FAIR

Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality?

Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects

CINECA discovery service catalog

MGnify quick tour

Structural volume data

Finding the data behind research publications with Europe PMC

Discovering scientific evidence using Europe PMC SciLite annotation

Ensembl: Quick tour

Bioinformatics for the terrified: An introduction to the science of bioinformatics

Reactome: Tools for analysing biological pathways

Managing a Bioinformatics Core Facility: CABANA Virtual Workshop Handbook

Annotate your proteins with the UniProt Functional Annotation system UniFire

Preprint discovery 101: Tips & tricks for authors and readers

Proteomics bioinformatics

Integrating publications into bioinformatics analysis

HPC boosts mathematical models’ promises of personalised medicine

Using in situ cryoET to investigate intracellular host-pathogen interactions

Science communication: dissemination of scientific results to a variety of audiences

Integrating structural biology and bioinformatics to study infection

Metagenomic discovery of novel antimicrobial enzymes from Earth’s extremes

Discovery and Variant Effect Prediction with the next generation of ProtVar

FEBS: In Silico Systems Biology: Network Reconstruction, Analysis and Network-based Modelling

Using the Ensembl Genome Browser

Interpreting the effects of genetic variants on protein structure and function

Byte-sized green computing

EBI - Joint EBI-Wellcome Trust Proteomics Bioinformatics workshop

Automated X-ray fragment and ligand screening for therapeutic innovation in infection biology

Ocean function and value: marine ecosystem mapping and services

How do parasites evade immune clearance? A structural perspective

Exploring the MGnify Genomes catalogues: from contigs to MAGs

Rebuilding microbial genomes with MGnify: from reads to contigs annotation

UniProt

Genome bioinformatics: from short- to long-read sequencing

Exploring microbial communities through metagenomics bioinformatics

From sequences to structures: protein characterisation using EMBL-EBI APIs

AlphaFold for gene structure annotation

AlphaFold in practice: research use cases

Methods for infectious disease modelling using genomics

Structural bioinformatics

Introduction to multi-omics data integration and visualisation

Uncovering protein function with UniProt

Who’s there? Reading microbial communities through DNA barcodes with MGnify

MGnify Proteins: accessing billions of metagenomic protein sequences and their metadata

Microbial metagenomics with MGnify: what can metagenomic raw reads tell us?

Designing sustainable systems: sustainability assessment of bio-based products and processes

An introduction to the MGnify data resource

CINECA PROJECT

European Bioinformatics Institute (EBI)